contig  match pos. 
in query
 orient.   match pos. 
in target
data base entry
00879 70637 70741 +2 1 35 mus musculus (mouse). putative heterogeneous nuclear ribonucleoprotein x (hnrnp x) (cbp). 11/1997 Length = 362
00879 74931 74966 +3 31 42
00879 75340 75492 +1 43 93
00879 83698 83838 +1 82 128
00879 85242 85379 +3 125 170
00879 88294 88374 +1 169 195
00879 114373 114561 +1 295 357
00879 114379 114453 +1 110 134
00879 114469 114513 +1 141 155
..........
00879 114373 114534 +1 398 451 homo sapiens (human), and rattus norvegicus (rat). heterogeneous nuclear ribonucleoprotein k (hnrnp k) (dc-stretch binding protein) (csbp) (transformation upregulated nuclear prot Length = 463
..........
00879 163421 163480 +2 596 615 homo sapiens (human). collagen alpha 6(iv) chain precursor. 11/1997 Length = 1678
00879 163421 163489 +2 140 162
..........
00879 165322 165402 +1 1264 1290 homo sapiens (human). collagen alpha 5(iv) chain precursor. 7/1999 Length = 1685
00879 166347 166418 +3 1346 1369
00879 166474 166557 +1 1040 1067
00879 168474 168572 +3 1376 1408
..........
00879 165116 165166 +2 287 303 canis familiaris (dog). collagen alpha 5(iv) chain (fragment). 7/1998 Length = 754
00879 166347 166418 +3 422 445
..........
00879 163927 163995 +1 847 869 homo sapiens (human). collagen alpha 4(iv) chain precursor. 7/1999 Length = 1690
00879 165101 165163 +2 1034 1054
..........
00879 162052 161969 -2 1226 1253 homo sapiens (human). collagen alpha 3(iv) chain precursor. 7/1999 Length = 1670
00879 163503 163426 -3 1090 1115
00879 168510 168599 +3 363 392
..........
00879 147175 147216 +1 3 16 homo sapiens (human). collagen alpha 2(viii) chain (endothelial collagen) (fragment). 11/1995 Length = 635
00879 147347 147382 +2 14 25
00879 168504 168599 +3 77 108
..........
00879 156970 157032 +1 50 70 mus musculus (mouse). collagen alpha 2(vi) chain precursor. 12/1998 Length = 1029
00879 165316 165399 +1 300 327
00879 166507 166596 +1 440 469
00879 167067 167147 +3 414 440
00879 168510 168599 +3 503 532
..........
00879 167067 167168 +3 167 200 homo sapiens (human). collagen alpha 2(vi) chain (fragment). 12/1998 Length = 353
00879 168510 168599 +3 256 285
..........
00879 165316 165399 +1 290 317 gallus gallus (chicken). collagen alpha 2(vi) chain precursor. 12/1998 Length = 1022
00879 165319 165390 +1 411 434
00879 166347 166412 +3 544 565
00879 166350 166412 +3 554 574
00879 166353 166412 +3 481 500
00879 166504 166590 +1 270 298
00879 166507 166596 +1 430 459
00879 167070 167153 +3 429 456
00879 167085 167147 +3 547 567
00879 167085 167147 +3 568 588
00879 167085 167168 +3 407 434
00879 168507 168572 +3 539 560
00879 168507 168572 +3 563 584
..........
00879 165322 165402 +1 126 152 homo sapiens (human). collagen alpha 2(v) chain precursor. 7/1999 Length = 1496
00879 166338 166409 +3 256 279
00879 167085 167159 +3 1078 1102
..........
00879 165110 165166 +2 802 820 mus musculus (mouse). collagen alpha 2(iv) chain precursor. 7/1999 Length = 1707
00879 166353 166418 +3 370 391
..........
00879 165110 165163 +2 300 317 homo sapiens (human). collagen alpha 2(iv) chain precursor. 7/1999 Length = 1712
00879 165307 165378 +1 1360 1383
00879 166483 166536 +1 330 347
00879 167067 167147 +3 1415 1441
00879 167076 167147 +3 137 160
00879 168495 168572 +3 191 216
..........
00879 147366 147313 -3 342 359 ascaris suum (pig roundworm) (ascaris lumbricoides). collagen alpha 2(iv) chain precursor. 7/1999 Length = 1763
00879 163427 163528 +2 1175 1208
00879 165101 165163 +2 1307 1327
..........
00879 166332 166409 +3 933 958 homo sapiens (human). collagen alpha 2(i) chain precursor. 7/1999 Length = 1366
00879 166483 166554 +1 995 1018
..........
00879 163421 163480 +2 1243 1262 homo sapiens (human). collagen alpha 1(xvi) chain precursor. 11/1995 Length = 1603
00879 165271 165381 +1 1341 1377
..........
00879 165295 165378 +1 1190 1217 mus musculus (mouse). collagen alpha 1(xi) chain precursor. 7/1998 Length = 1804
00879 167091 167168 +3 1220 1245
..........
00879 168471 168566 +3 439 470 bos taurus (bovine). collagen alpha 1(xi) chain (fragment). 7/1998 Length = 911
00879 168498 168572 +3 571 595
..........
00879 167067 167147 +3 1318 1344 homo sapiens (human). collagen alpha 1(vii) chain precursor (long-chain collagen) (lc collagen). 7/1999 Length = 2944
00879 167067 167153 +3 1309 1337
..........
00879 156194 156256 +2 1 21 mus musculus (mouse). collagen alpha 1(vi) chain precursor. 11/1995 Length = 1025
00879 156976 157107 +1 32 75
00879 158610 158813 +3 75 142
00879 160858 161028 +1 139 195
00879 161287 161415 +1 196 238
00879 161950 161997 +1 252 267
00879 163421 163480 +2 266 285
00879 163424 163489 +2 393 414
00879 163951 163995 +1 286 300
00879 164718 164765 +3 318 333
00879 165110 165163 +2 266 283
00879 165113 165169 +2 333 351
00879 165307 165381 +1 485 509
00879 165319 165381 +1 252 272
00879 165319 165402 +1 486 513
00879 165322 165384 +1 352 372
00879 165322 165384 +1 385 405
00879 166347 166409 +3 449 469
00879 166347 166421 +3 431 455
00879 166350 166415 +3 372 393
00879 166353 166409 +3 277 295
00879 166504 166557 +1 267 284
00879 166504 166602 +1 393 425
00879 166525 166593 +1 256 278
00879 166694 166741 +2 408 423
00879 167088 167147 +3 297 316
00879 167088 167150 +3 432 452
00879 167088 167150 +3 489 509
00879 167088 167153 +3 252 273
00879 167088 167153 +3 423 444
00879 167088 167153 +3 480 501
00879 167091 167153 +3 265 285
00879 167091 167153 +3 400 420
00879 167091 167153 +3 415 435
00879 167091 167153 +3 522 542
00879 168507 168569 +3 372 392
00879 168507 168572 +3 480 501
00879 168510 168569 +3 445 464
00879 168510 168578 +3 403 425
..........
00879 161962 161997 +1 1 12 homo sapiens (human). collagen alpha 1(vi) chain (fragment). 12/1998 Length = 336
00879 163421 163480 +2 11 30
00879 163424 163477 +2 138 155
00879 163951 163995 +1 31 45
00879 164718 164765 +3 63 78
00879 165110 165163 +2 11 28
00879 165113 165169 +2 78 96
00879 165319 165384 +1 177 198
00879 165322 165384 +1 97 117
00879 166350 166415 +3 117 138
00879 166353 166409 +3 22 40
00879 166492 166575 +1 203 230
00879 166492 166602 +1 134 170
00879 166501 166572 +1 176 199
00879 166504 166557 +1 12 29
00879 166694 166741 +2 153 168
00879 167091 167168 +3 208 233
00879 168507 168572 +3 225 246
00879 168510 168572 +3 190 210
..........
00879 156976 157107 +1 33 76 gallus gallus (chicken). collagen alpha 1(vi) chain precursor. 11/1995 Length = 1019
00879 158610 158813 +3 76 143
00879 160858 161028 +1 140 196
00879 161287 161373 +1 197 225
00879 161953 161997 +1 252 266
00879 163424 163480 +2 266 284
00879 163427 163477 +2 426 442
00879 163930 163989 +1 446 465
00879 163951 163995 +1 285 299
00879 164715 164777 +3 316 336
00879 165113 165163 +2 266 282
00879 165113 165169 +2 332 350
00879 165259 165384 +1 330 371
00879 165316 165384 +1 298 320
00879 165319 165378 +1 383 402
00879 165328 165381 +1 254 271
00879 166338 166412 +3 256 280
00879 166501 166554 +1 253 270
00879 166504 166557 +1 266 283
00879 166504 166593 +1 392 421
00879 166507 166572 +1 285 306
00879 166507 166572 +1 381 402
00879 166694 166747 +2 407 424
00879 167088 167147 +3 296 315
00879 167088 167147 +3 383 402
00879 167088 167150 +3 422 442
00879 167088 167150 +3 464 484
00879 167088 167153 +3 566 587
00879 167088 167159 +3 410 433
00879 167091 167150 +3 261 280
00879 167091 167150 +3 432 451
00879 167091 167150 +3 459 478
00879 167091 167153 +3 264 284
00879 167091 167153 +3 480 500
00879 168507 168572 +3 353 374
00879 168510 168569 +3 444 463
..........
00879 163421 163477 +2 1315 1333 mus musculus (mouse). collagen alpha 1(iv) chain precursor. 7/1999 Length = 1669
00879 163424 163480 +2 283 301
00879 163424 163480 +2 295 313
00879 163424 163489 +2 78 99
00879 165113 165163 +2 172 188
00879 165113 165163 +2 343 359
00879 165113 165166 +2 1271 1288
00879 165307 165378 +1 1367 1390
00879 165316 165384 +1 110 132
00879 166338 166409 +3 1415 1438
00879 166347 166412 +3 285 306
00879 166483 166554 +1 1412 1435
00879 166492 166554 +1 406 426
00879 166492 166554 +1 809 829
00879 167067 167153 +3 892 920
00879 167079 167150 +3 884 907
00879 168474 168572 +3 1363 1395
..........
00879 163427 163477 +2 379 395 homo sapiens (human). collagen alpha 1(iv) chain precursor. 7/1999 Length = 1669
00879 163427 163480 +2 284 301
00879 165113 165163 +2 343 359
00879 165116 165163 +2 562 577
00879 165116 165163 +2 1023 1038
00879 165307 165378 +1 1367 1390
00879 165316 165381 +1 472 493
00879 165316 165384 +1 110 132
00879 165316 165384 +1 1246 1268
00879 165319 165390 +1 277 300
00879 165322 165432 +1 513 549
00879 166347 166409 +3 354 374
00879 166483 166554 +1 1412 1435
00879 166492 166554 +1 809 829
00879 166492 166557 +1 478 499
00879 166504 166593 +1 277 306
00879 166504 166596 +1 866 896
00879 166507 166593 +1 1088 1116
00879 167067 167153 +3 892 920
00879 167079 167150 +3 884 907
00879 167085 167153 +3 973 995
00879 168474 168572 +3 1363 1395
00879 168504 168581 +3 312 337
..........
00879 168483 168572 +3 1329 1358 drosophila melanogaster (fruit fly). collagen alpha 1(iv) chain precursor. 7/1999 Length = 1775
..........
00879 165322 165411 +1 989 1018 mus musculus (mouse). collagen alpha 1(iii) chain precursor. 7/1999 Length = 1464
00879 166338 166415 +3 1068 1093
..........
00879 165316 165411 +1 988 1019 homo sapiens (human). collagen alpha 1(iii) chain precursor. 7/1999 Length = 1466
00879 166706 166777 +2 1185 1208
..........
00879 168474 168572 +3 179 211 rattus norvegicus (rat). collagen alpha 1(i) chain (fragments). 11/1995 Length = 671
..........
00879 168474 168572 +3 330 362 mus musculus (mouse). collagen alpha 1(i) chain precursor. 7/1999 Length = 1453
..........
00879 168474 168572 +3 341 373 homo sapiens (human). collagen alpha 1(i) chain precursor. 7/1999 Length = 1464
..........
00879 163427 163480 +2 720 737 gallus gallus (chicken). collagen alpha 1(i) chain precursor. 7/1999 Length = 1453
00879 165307 165381 +1 976 1000
00879 167091 167159 +3 1113 1135
00879 168510 168578 +3 1161 1183
..........
00879 165307 165381 +1 549 573 bos taurus (bovine). collagen alpha 1(i) chain (fragments). 11/1995 Length = 779
00879 166338 166409 +3 120 143
00879 166338 166409 +3 492 515
00879 167091 167168 +3 686 711
00879 168510 168578 +3 734 756
..........
00879 162476 162414 -1 916 936 human herpesvirus 6. similar to hhv6a u86. 11/1998 Length = 949
..........
00879 165322 165393 +1 1719 1742 mus musculus (mouse). type vii collagen. 5/1999 Length = 2944
00879 166338 166424 +3 1747 1775
..........
00879 147037 146999 -2 60 72 rattus norvegicus (rat). alpha 1-viii collagen (fragment). 5/1999 Length = 172
00879 147378 147313 -3 6 27
00879 165116 165166 +2 28 44
00879 165295 165378 +1 103 130
..........
00879 168474 168572 +3 330 362 rattus norvegicus (rat). collagen alpha1 (fragment). 5/1999 Length = 1453
..........
00879 147387 147313 -3 1404 1428 mus musculus (mouse). procollagen, type xviii, alpha 1 precursor (xviii) collagen (procollagen, type xviii, alpha 1) (alpha-1 type xviii collagen). 5/1999 Length = 1774
00879 165322 165411 +1 823 852
00879 166350 166424 +3 791 815
00879 166507 166596 +1 841 870
..........
00879 166483 166560 +1 668 693 mus musculus (mouse). procollagen, type v, alpha 2. 5/1999 Length = 1497
..........
00879 114373 114534 +1 398 451 mus cookii. heterogeneous nuclear ribonucleoprotein k (hnrnp k) (phosphoprotein). 5/1999 Length = 464
..........
00879 165113 165169 +2 637 655 mus musculus (mouse). procollagen, type xix, alpha 1 (collagen a1 xix chain). 5/1999 Length = 1136
00879 166353 166418 +3 653 674
..........
00879 163427 163480 +2 650 667 gallus gallus (chicken). alpha-1 collagen type iii (fragment). 5/1999 Length = 886
00879 165307 165378 +1 699 722
00879 166483 166554 +1 564 587
00879 167067 167150 +3 636 663
00879 167070 167153 +3 838 865
00879 168504 168572 +3 831 853
..........
00879 165307 165378 +1 123 146 gallus gallus (chicken). hypothetical protein (fragment). 5/1999 Length = 310
00879 167067 167150 +3 60 87
00879 167070 167153 +3 262 289
00879 168504 168572 +3 255 277
..........
00879 165319 165408 +1 307 336 gallus gallus (chicken). novel collagen protein (fragment). 5/1999 Length = 1146
00879 167070 167174 +3 477 511
..........
00879 165316 165399 +1 290 317 gallus gallus (chicken). type vi collagen subunit alpha2. 5/1999 Length = 918
00879 165319 165369 +1 498 514
00879 165319 165384 +1 444 465
00879 165319 165390 +1 411 434
00879 165322 165384 +1 289 309
00879 166347 166412 +3 544 565
00879 166350 166412 +3 554 574
00879 166353 166412 +3 481 500
00879 166501 166554 +1 497 514
00879 166501 166554 +1 562 579
00879 166501 166572 +1 293 316
00879 166504 166590 +1 270 298
00879 166507 166596 +1 430 459
00879 167070 167153 +3 429 456
00879 167085 167147 +3 547 567
00879 167085 167147 +3 568 588
00879 167085 167168 +3 407 434
00879 168507 168572 +3 539 560
00879 168507 168572 +3 563 584
00879 168510 168572 +3 567 587
..........
00879 166332 166409 +3 41 66 coturnix coturnix japonica (japanese quail). pro-alpha2(i) collagen (fragment). 5/1999 Length = 215
00879 166694 166738 +2 17 31
00879 167091 167162 +3 51 74
00879 167091 167168 +3 168 193
00879 167091 167174 +3 180 207
..........
00879 75340 75492 +1 10 60 sus scrofa (pig). putative heterogeneous nuclear ribonucleoprotein x (hnrnp x) (cbp) (hnrnp-e2 protein) (fragment). 5/1999 Length = 145
00879 83698 83838 +1 49 95
00879 85242 85325 +3 92 119
00879 85316 85369 +2 117 134
..........
00879 114373 114561 +1 68 130 sus scrofa (pig). heterogeneous nuclear ribonucleoprotein (fragment). 5/1999 Length = 135
..........
00879 114373 114534 +1 398 451 oryctolagus cuniculus (rabbit). heterogeneous nuclear ribonucleoprotein k (hnrnp k) (dc-stretch binding protein) (csbp) (transformation upregulated nuclear protein) (tunp). 5/1999 Length = 463
..........
00879 70637 70741 +2 1 35 oryctolagus cuniculus (rabbit). hnrnp-e1 protein. 5/1999 Length = 356
00879 75340 75492 +1 43 93
00879 83698 83838 +1 82 128
00879 85242 85382 +3 125 171
00879 88312 88389 +1 180 205
00879 114373 114564 +1 290 353
00879 114379 114453 +1 110 134
00879 114469 114516 +1 141 156
..........
00879 167061 167147 +3 137 165 strongylocentrotus purpuratus (purple sea urchin). alpha-1 collagen. 5/1999 Length = 1414
00879 168495 168566 +3 331 354
..........
00879 165113 165169 +2 595 613 brugia malayi. a2 (iv) basement membrane collagen (iv). 5/1999 Length = 1802
00879 165307 165402 +1 679 710
..........
00879 75340 75456 +1 53 91 drosophila melanogaster (fruit fly). nucleic acid binding protein. 11/1998 Length = 386
00879 83737 83844 +1 104 139
00879 85242 85379 +3 134 179
00879 88294 88344 +1 178 194
00879 114373 114465 +1 300 330
00879 114466 114543 +1 334 359
..........
00879 165307 165384 +1 33 58 arenicola marina (lugworm) (rock worm). fibrillar collagen (fragment). 5/1999 Length = 684
00879 167079 167168 +3 199 228
00879 167085 167168 +3 102 129
00879 168504 168572 +3 339 361
..........
00879 166408 166337 -2 199 222 mytilus edulis (blue mussel). precollagen d. 5/1999 Length = 922
00879 166408 166337 -2 211 234
00879 166562 166500 -1 181 201
00879 168474 168566 +3 539 569
..........
00879 165101 165163 +2 147 167 homo sapiens (human). collagen type vi alpha 2(vi) chain. 5/1999 Length = 345
00879 165316 165399 +1 45 72
00879 165319 165390 +1 166 189
00879 166338 166409 +3 171 194
00879 166350 166415 +3 64 85
00879 166350 166421 +3 244 267
00879 166507 166596 +1 185 214
00879 167067 167168 +3 159 192
00879 168510 168599 +3 248 277
..........
00879 163951 163995 +1 1 15 homo sapiens (human). collagen alpha 1(vi) chain (fragment). 5/1999 Length = 306
00879 164718 164765 +3 33 48
00879 165113 165169 +2 48 66
00879 165322 165384 +1 67 87
00879 165322 165384 +1 124 144
00879 166347 166421 +3 146 170
00879 166350 166415 +3 87 108
00879 166492 166557 +1 209 230
00879 166492 166575 +1 173 200
00879 166492 166602 +1 104 140
00879 166501 166572 +1 146 169
00879 166694 166741 +2 123 138
00879 167091 167168 +3 178 203
00879 168507 168572 +3 195 216
00879 168510 168572 +3 160 180
..........
00879 70637 70741 +2 1 35 homo sapiens (human). poly(c)-binding protein-2 (hnrnp-e2). 5/1999 Length = 365
00879 74931 74966 +3 31 42
00879 75340 75492 +1 43 93
00879 83698 83838 +1 82 128
00879 85242 85382 +3 125 171
00879 88294 88374 +1 173 199
00879 114373 114561 +1 298 360
00879 114379 114453 +1 110 134
00879 114469 114513 +1 141 155
..........
00879 70637 70741 +2 1 35 homo sapiens (human). poly(c)-binding protein-1 (nucleic acid binding protein sub2.3) (hnrnp-e1) (alpha-cp1). 5/1999 Length = 356
00879 75340 75492 +1 43 93
00879 83698 83838 +1 82 128
00879 85242 85382 +3 125 171
00879 88312 88374 +1 180 200
00879 114373 114564 +1 290 353
00879 114379 114453 +1 110 134
00879 114469 114516 +1 141 156
..........
00879 166338 166409 +3 146 169 homo sapiens (human). collagen ii alpha 1 chain (fragment). 5/1999 Length = 243
00879 166483 166554 +1 170 193
..........
00879 156194 156289 +2 1 32 homo sapiens (human). collagen vi alpha-1 n-terminal globular domain precursor (fragment). 11/1998 Length = 256
00879 156976 157107 +1 33 76
00879 158610 158813 +3 76 143
00879 160858 161028 +1 140 196
00879 161287 161415 +1 197 239
00879 161498 161548 +2 240 256
..........
00879 163421 163480 +2 596 615 homo sapiens (human). a type iv collagen (col4a6) (collagen alpha 6(iv)) (fragment). 8/1999 Length = 1690
00879 163421 163489 +2 140 162
00879 165104 165163 +2 1046 1065
00879 165325 165393 +1 1076 1098
00879 166347 166418 +3 137 160
00879 166483 166554 +1 196 219
..........
00879 167085 167159 +3 77 101 homo sapiens (human). procollagen type v alpha-2 chain (fragment). 5/1999 Length = 225
..........
00879 166483 166554 +1 177 200 homo sapiens (human). pro alpha 1(i) collagen. 5/1999 Length = 1461
00879 166483 166575 +1 330 360
00879 168474 168572 +3 338 370
..........
00879 160870 161028 +1 1 53 homo sapiens (human). collagen vi-alpha-1 chain (fragment). 11/1998 Length = 125
00879 161287 161415 +1 54 96
00879 161498 161548 +2 97 113
00879 161950 161997 +1 110 125